rs33894048 SNP Detail

Summary

• ID
  rs33894048
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116323002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGAAGATCT AGGATGCAAT CAGAAGTCTA ACTTGGGTCG AAATCACAAG GCCAAGAGTT
  CAATCCCCAC CCCATTTATA GTGAAATAAC ACATCATACT TACTAGAATT ACTAAAATTT
  TAAAAAGATA GATATAAAAA GTGTTGGTGT GACTGTGGGG AGTTGGAATC TCCATATCTG
  GCCAAGGGAG ACTGTGGAAC AGTAGCAGTT TCTCCAGGGC TTGCATACAG TGATCCACCA
  TGATGCTACA CACAGTGATC CACCATGATG CTACATACAG TGATCCACCA TGATGTTACA
  Y
  ACAGTGATCC ACCATGATGC TACATACAGT GATCCACCAT GATGTTACAC ACAGTGATCC
  ACCATGCATG CTACATACAG TGATCCACCA TGATGTTACA TACAGTGATC CACCATGATG
  TTACATACAG TGATCCACCA TGATGTTACA TACAGTGATC CACCATGATG CTACATACAG
  TGATCCACCA TGATGCTACA TACAGTGATC CACCATGATG CTACATACAG TGATCCACCA
  TGATGCTACA TACAGTGATC CACCATGATG TTACACACAG TGATCCACCA TGATGCTACA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45972959	mCV27550629	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33894048					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116323002 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Marchf8	membrane associated ring-CH-type finger 8			Intron
				mRNA-UTR
Rr637191	regulatory region 637191			1997 bp proximal