rs33851783 SNP Detail

Summary

• ID
  rs33851783
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118284796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATCT CCGTTCCAGG AAATCCTCTC
  Y
  GTGCCTCCTA AAGCTAGGAC TCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45585323	mCV23178089	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147308072	ENSMUSSNP5635383	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321283182	CHEV_4_118100204	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33851783					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118284796 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14684	CpG island 14684	187 bp proximal
Elovl1	ELOVL fatty acid elongase 1	525 bp upstream
Rr598393	regulatory region 598393	4 bp proximal
Rr598394	regulatory region 598394	649 bp proximal
Rr598395	regulatory region 598395	1612 bp proximal
Tssr38657	transcription start site region 38657	701 bp downstream
Tssr38658	transcription start site region 38658	479 bp upstream
Tssr38659	transcription start site region 38659	1197 bp upstream