rs33639573 SNP Detail

Summary

• ID
  rs33639573
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103671467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTA TTAAAGGGTT GCAGCACTAG
  K
  AAGGTTGAGA ACTGCTGCTT TAGGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45302843	mCV22333304	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss147139743	ENSMUSSNP1410686	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss320442895	CHEV_2_103681279	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33639573					SNP	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103671467 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	1887 bp downstream
Gm56363	predicted gene, 56363	1918 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr373620	regulatory region 373620	792 bp upstream
Rr561947	regulatory region 561947	1291 bp proximal