rs33622503 SNP Detail

Summary

• ID
  rs33622503
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129087369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC ATCTCTTCAG CCCGAGGTTT
  K
  TTTTTGTTTT GTTTTGTTTT GTTTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45301255	mCV24474025	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33622503					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129087369 () rs orientation: forward

Symbol	Name	Function Class
Gm14024	predicted gene 14024	927 bp upstream
Rr373845	regulatory region 373845	493 bp upstream
Rr564889	regulatory region 564889	1853 bp distal
Rr564890	regulatory region 564890	1233 bp distal
Rr564891	regulatory region 564891	790 bp distal
Rr564892	regulatory region 564892	273 bp distal
Rr564893	regulatory region 564893	60 bp proximal
Tssr20109	transcription start site region 20109	908 bp upstream