rs33589408 SNP Detail

Summary

• ID
  rs33589408
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:66303279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCCCTGGT GTTCCCTGTA CTGGGACATA TAAAGTTTGC
  AAGACCAAGG GGCCTCTCTT CCCAGTGATG GCCAACTAGG CCATCTTCTG CTACATATGC
  R
  GCTAGAGACA CGAGCTCCAG GGGGGGGGGG GTACTGGTTA GTTCATATTG TTGTTCCACC
  TATAGGGTTG CAGACCCCTT CAGCTCCTTG GGTACTTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45296729	mCV24269135	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146717085	ENSMUSSNP6917138	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33589408					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:66303279 () rs orientation: forward

Symbol	Name	Function Class
Gm13629	predicted gene 13629	within coordinates
Rr558187	regulatory region 558187	352 bp proximal
Rr558188	regulatory region 558188	447 bp proximal
Rr558189	regulatory region 558189	806 bp proximal