rs33567158 SNP Detail

Summary

• ID
  rs33567158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:52523863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGT GGTCCACCCA TAATCTCAGC
  R
  CCCTGGAGGA GGAGAGAGGA AACCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45793879	mCV25026903	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148440030	ENSMUSSNP7035377	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs33567158					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:52523863 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15854	CpG island 15854	1583 bp proximal
D5Dcr65	DNA Segment, Chr 5, Derry C. Roopenian 65	126 bp proximal
Sod3	superoxide dismutase 3, extracellular	Intron
Tssr46171	transcription start site region 46171	1931 bp upstream
Tssr46172	transcription start site region 46172	1950 bp upstream