rs33527369 SNP Detail

Summary

• ID
  rs33527369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17109580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTA GAACACTTAA GACTGTCCCT
  R
  ACTGCATAAA AAATGCCTTT CCTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss47808618	NES11712333	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A	G	A	A		G	A
ss133009942	ENSMUSSNP6414537	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321753567	CHEV_6_17059581	CHEVERUD	SCREENING_POP	f	SNP									G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs33527369					SNP	A	A	A	A	A	G	A	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47808618	NES11712333	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17109580 () rs orientation: forward

Symbol	Name	Function Class
Gm4876	predicted gene 4876	within coordinates
Gm53251	predicted gene, 53251	within coordinates
Rr626766	regulatory region 626766	within coordinates
Rr626767	regulatory region 626767	1099 bp proximal