rs33393173 SNP Detail

Summary

• ID
  rs33393173
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:66294293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATT TCTGTGTTGG TGGCACTAAA
  R
  GAGCGGGTGT CTCTCACCAC CAAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45273302	mCV24268796	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss146717042	ENSMUSSNP2142291	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320324033	CHEV_2_66302006	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33393173					SNP	A	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:66294293 () rs orientation: forward

Symbol	Name	Function Class
Gm13629	predicted gene 13629	within coordinates
Rr558184	regulatory region 558184	1278 bp distal
Rr558185	regulatory region 558185	924 bp proximal
Rr558186	regulatory region 558186	1683 bp proximal