rs33344704 SNP Detail

Summary

• ID
  rs33344704
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103668415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC TGGATCCAAT CTCAGCAGTG
  K
  TTGAGTCTAC AGTGCAGGCT CTAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45267125	mCV22333243	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T
ss147139587	ENSMUSSNP1711753	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
ss320442866	CHEV_2_103678227	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33344704					SNP	G	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103668415 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	884 bp upstream
Gm13877	predicted gene 13877	553 bp upstream
Gm56363	predicted gene, 56363	1039 bp upstream
Gm75184	predicted gene, 75184	within coordinates
Rr561946	regulatory region 561946	609 bp proximal
Tssr19174	transcription start site region 19174	850 bp upstream