rs33331591 SNP Detail

Summary

• ID
  rs33331591
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118941570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAG GCAGATTTCT GTTCAAGGTT
  R
  GCCTGGTCTA CAGAGTGAGT TCCGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45265541	mCV23833167	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs33331591					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118941570 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12105	CpG island 12105	1290 bp proximal
Gm57476	predicted gene, 57476	1061 bp downstream
Rad51	RAD51 recombinase	1725 bp upstream
Rr563414	regulatory region 563414	440 bp proximal
Rr563415	regulatory region 563415	631 bp proximal
Rr563416	regulatory region 563416	1228 bp proximal
Rr563417	regulatory region 563417	1731 bp proximal
Tssr19603	transcription start site region 19603	1720 bp upstream
Tssr25799	transcription start site region 25799	1659 bp downstream