rs33297135 SNP Detail

Summary

• ID
  rs33297135
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:113893027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTGGACTC AAGGATCAAT GAAACTCAAA GATGTCCCAC
  ATTTTCATTT TGTCAATAAT TTAGCAAAAT GTTTCAAATG AAGAATATTT ATTCTTTTAT
  R
  TTTATTTGGT GTGTGTGTGT GTGTTGCTGT ATATGTGTGG AGGTCAAAAA ATATCTTGCA
  CAATTTAGTT GTCTCCTTCT GCCATGTGGC TCCTAGGGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45261314	mCV25104542	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147246081	ENSMUSSNP5601619	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33297135					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:113893027 () rs orientation: forward

Symbol	Name	Function Class
Actc1dt	actin, alpha, cardiac muscle 1 divergent transcript	1041 bp downstream
Rr562822	regulatory region 562822	1563 bp proximal
Tssr19457	transcription start site region 19457	1370 bp downstream
Tssr19458	transcription start site region 19458	1351 bp downstream