rs33272100 SNP Detail

Summary

• ID
  rs33272100
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127101265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             TCATATAAAG GTCCCTGGTT GTGTTTCCCC CCCAAGGGGA AAAATTAAAA
  K
  GCAAAACAAA AACCAGGAAC TACAAATGAG AACGCAAATG CCAGTGGCTG           
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45258131	mCV22837137	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss147524699	ENSMUSSNP5496217	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33272100					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127101265 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	53 bp proximal
Tmem127	transmembrane protein 127	mRNA-UTR
Tssr20001	transcription start site region 20001	718 bp downstream