rs33256643 SNP Detail

Summary

• ID
  rs33256643
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:66303269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCTCTTCT TGGCCCTGGT GTTCCCTGTA CTGGGACATA
  TAAAGTTTGC AAGACCAAGG GGCCTCTCTT CCCAGTGATG GCCAACTAGG CCATCTTCTG
  M
  TACATATGCA GCTAGAGACA CGAGCTCCAG GGGGGGGGGG GTACTGGTTA GTTCATATTG
  TTGTTCCACC TATAGGGTTG CAGACCCCTT CAGCTCCTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45256713	mCV24269134	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss146717083	ENSMUSSNP495936	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33256643					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:66303269 () rs orientation: forward

Symbol	Name	Function Class
Gm13629	predicted gene 13629	within coordinates
Rr558187	regulatory region 558187	362 bp proximal
Rr558188	regulatory region 558188	457 bp proximal
Rr558189	regulatory region 558189	816 bp proximal