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rs33150761 SNP Detail
Summary
  • ID
    rs33150761
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:95858762 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCCAACCCCC GCCCCATCCC
    TTGTCAGAGC TCCCGTGCAT GCGCAGTCGC GCCGGAAGCA CGGCTCTGGA GTTTCCGCAT
    CACGGACCTC AGGGATCCTC TACGCTGTTC ATTGTCCTTC GGGTCTCGCA ACGTTTGCCT
    AATGATTCCC AATTTCAGTG TTGCATCATT CTAAAGCCTG ATGTTGAAGA CTATCGCCCA
    R
    CCCTGGTTAG CCAGTAATCG GAAACAGCAA CGTTATGTGT CTTCTAAAGA AATGAGGGCT
    AGTTTTGTTT TGTTGTTTTT GGTTTTTTTT CGAGACAGGG TTTCTCTGTG TAGCCCTGGC
    TGTCCTGAAA CTCACTCTGT AGACCAGGCT GGCCTCGAAC TCAGAAATCC GCCTGCCTCT
    GCCTCCCAAG TGCTAGGATT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
WSB/EiJ
ss46778189 NES10734341 PERLEGEN MM_PANEL2 f SNP A A A A A A A A A A A A G A
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
WSB/EiJ
rs33150761 SNP A A A A A A A A A A A A G A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46778189 NES10734341 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:95858762 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi13530 CpG island 13530 within coordinates
Gm56819 predicted gene, 56819 159 bp upstream
Gm65572 predicted gene, 65572 within coordinates
Rr375411 regulatory region 375411 within coordinates
Rr581095 regulatory region 581095 170 bp distal
Rr581096 regulatory region 581096 112 bp distal
Rr581097 regulatory region 581097 within coordinates
Rr581098 regulatory region 581098 1648 bp proximal
Tssr30663 transcription start site region 30663 364 bp downstream
Tssr30664 transcription start site region 30664 83 bp downstream
Tssr34570 transcription start site region 34570 414 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory