rs33148705 SNP Detail

Summary

• ID
  rs33148705
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95856321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCCCAGC CCTGGTAAAA
  TACGTTACAA AGACTTACTG ACTGACTTTT AACTTAAGAG TATGTGTGAG CCTTCAGATC
  CCTTGGAACA AAGATTTTTT GGCTGTGTAA GCTGGTAACT CACCTGAGCC TCTGTAAGAG
  CAGCAAGTGC TCCTAACTGC AGAGCCACCT TCAGCTCAAG TTCAAGTTGT TCAAGTCTTA
  S
  GGCTTCTTAA CCTGCTAAGA CCCTATAGTA GGGTAACCGT GACTAAGAAA GACGAAGGAA
  AGTATGTATT TCAGTTAAGT TCTTGAATAT TTCCCTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGAGAGA GAGAGAGAGA GAGAGAGAGA GAGCATCATT TGGATGCCTC CTTAGAGAAA
  TGTGCATCCA CCATTAAATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46778156	NES10734441	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33148705					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46778156	NES10734441	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95856321 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	1622 bp downstream
Cpgi13530	CpG island 13530	1691 bp proximal
Gm56819	predicted gene, 56819	996 bp downstream
Rr375411	regulatory region 375411	1441 bp upstream
Rr581095	regulatory region 581095	1430 bp proximal