rs33148187 SNP Detail

Summary

• ID
  rs33148187
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95769605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGAACTC AACTAAGTCC
  TGTACAAAAG AGAAGCAGCG CCCTTAACTG CTGAGCCATC TCTCCAGCCC TAATATTTTC
  TTTCCTTCTC TCTCTCTCTC TCTCTCTCTC TCTCCTTCCT TCCTTCCTTC CTTCCTTCCT
  TCTTTCTTTC TGGCACCATG GTTTCTTGAA CTTTCCCAAA TCTTTATAAA CAGAAACTCT
  R
  TCATTACATG TATCTTCTGA TTGGCCCCTC TCCTAGGCTA GCAACAAATA TTACTGCTCC
  TATTCCATTT TTTTTATTCT TTCTTTTCTT TTCTTTTTCT TTTTTTAAGA TTCATTATTA
  TATGTAAGTA CAGTGTAGCT GACTTCAGAC ACACCAGAAG AGGGCATCAG ATCTCATTAT
  GGGTGGTTGT GAGCCACCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777658	NES10738690	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33148187					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777658	NES10738690	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95769605 () rs orientation: forward

Symbol	Name	Function Class
Gm26594	predicted gene, 26594	within coordinates
Mrps21	mitochondrial ribosomal protein S21	341 bp downstream
Rr581054	regulatory region 581054	1675 bp distal
Rr581055	regulatory region 581055	1770 bp distal
Rr581056	regulatory region 581056	855 bp distal
Rr581057	regulatory region 581057	120 bp distal
Rr581058	regulatory region 581058	244 bp distal
Rr581059	regulatory region 581059	150 bp proximal