rs33148184 SNP Detail

Summary

• ID
  rs33148184
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95769591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACCCATT AGGTGTTGGA
  ACTCAACTAA GTCCTGTACA AAAGAGAAGC AGCGCCCTTA ACTGCTGAGC CATCTCTCCA
  GCCCTAATAT TTTCTTTCCT TCTCTCTCTC TCTCTCTCTC TCTCTCTCCT TCCTTCCTTC
  CTTCCTTCCT TCCTTCTTTC TTTCTGGCAC CATGGTTTCT TGAACTTTCC CAAATCTTTA
  W
  AAACAGAAAC TCTATCATTA CATGTATCTT CTGATTGGCC CCTCTCCTAG GCTAGCAACA
  AATATTACTG CTCCTATTCC ATTTTTTTTA TTCTTTCTTT TCTTTTCTTT TTCTTTTTTT
  AAGATTCATT ATTATATGTA AGTACAGTGT AGCTGACTTC AGACACACCA GAAGAGGGCA
  TCAGATCTCA TTATGGGTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777655	NES10738688	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33148184					SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777655	NES10738688	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95769591 () rs orientation: forward

Symbol	Name	Function Class
Gm26594	predicted gene, 26594	within coordinates
Mrps21	mitochondrial ribosomal protein S21	355 bp downstream
Rr581054	regulatory region 581054	1661 bp distal
Rr581055	regulatory region 581055	1756 bp distal
Rr581056	regulatory region 581056	841 bp distal
Rr581057	regulatory region 581057	106 bp distal
Rr581058	regulatory region 581058	230 bp distal
Rr581059	regulatory region 581059	164 bp proximal