CTATGTATCT CTAATAAAAA TACATTTATT TAGAGACAGG TTCTCGTGAA GCCCTGGCTG GCCTGGAAGT CAGCAGATCA CTTGTTTCTG CCTCCAGTGT GCTTCAATAA GGCTGCAGTG CCCAGCCCTG GTAAAATACG TTACAAAGAC TTACTGACTG ACTTTTAACT TAAGAGTATG TGTGAGCCTT CAGATCCCTT R GAACAAAGAT TTTTTGGCTG TGTAAGCTGG TAACTCACCT GAGCCTCTGT AAGAGCAGCA AGTGCTCCTA ACTGCAGAGC CACCTTCAGC TCAAGTTCAA GTTGTTCAAG TCTTAGGGCT TCTTAACCTG CTAAGACCCT ATAGTAGGGT AACCGTGACT AAGAAAGACG AAGGAAAGTA TGTATTTCAG TTAAGTTCTT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46778153 | NES10734476 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | A | G | G | G | G | G | A |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
||||
rs33147842 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46778153 | NES10734476 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:95856205 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Anp32e | acidic nuclear phosphoprotein 32 family member E | 1506 bp downstream | ||||||
Cpgi13530 | CpG island 13530 | 1807 bp proximal | ||||||
Gm56819 | predicted gene, 56819 | 1112 bp downstream | ||||||
Rr375411 | regulatory region 375411 | 1557 bp upstream | ||||||
Rr581095 | regulatory region 581095 | 1546 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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