CTGTCAGTTT GGGGCTTTTA TGCGAGGCCT CCTGGGTCGT AATGTCCTGT CCAGTTCTTC TCTTCTACCC TAGGTGTACT GAGCCTGTTC CACCTGAGTC TTGCAGGGAT ATCGATCCTT TGGGTAGACC CCAGACCAGA TCAGAATGTG GAGTTAGAAG GATTGGGGTG TTGAGTCTGG AGTGGAAGGT TCATTCCTAA R TTCATCTGGC CCATGCTCCA AAATGGGTGA AGGGTGGGCA TTCCAGGTAG GCACAATAGC AGACAAAAAG ACATTGAGGC AAGGGAGCAT TTGGTCCCTG TGTGGCTCAT GCAGGAGAAT GGGAGGCAGG GTGGTCAAGA AGGAAATATG AGTTGGTTAG TCAGTCAATA TAGTTTTACT CCCTGGGAGA CCTGGGTCTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
MOLF/EiJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46777573 | NES11004176 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | A | G | A | A | G |
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
MOLF/EiJ |
PWD/PhJ |
WSB/EiJ |
||||
rs33146870 | SNP | G | G | G | G | G | A | G | A | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46777573 | NES11004176 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr4:155322057 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm52713 | predicted gene, 52713 | 820 bp downstream | ||||||
Rr1208 | regulatory region 1208 | 1433 bp downstream | ||||||
Rr606423 | regulatory region 606423 | 1864 bp distal | ||||||
Rr606424 | regulatory region 606424 | 1363 bp distal | ||||||
Rr606425 | regulatory region 606425 | 31 bp distal | ||||||
Rr606426 | regulatory region 606426 | 393 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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