rs33146463 SNP Detail

Summary

• ID
  rs33146463
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95767675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCAGCCA AAGTCCTGTC
  ACAGCAAACA TCAAAGGAAC CTACCACAGG ATAAAAAGAC AACCCACAGT GGGAGGCAAC
  ATCTACATGT CAGGTTCCTA AGGAAAGACC TGTCAACTCA GCAGTGAGGA CCCCCGCCTA
  AGGACTTGAA TGCTTCCTCA AAGGAGGAAC AGTAAACTCA CAAGAGGGCT CAAGGCATTA
  K
  CCACTAAAAA AGGGACAAGC CTGGAATCTC AACTGGAGAG GACAAGGCAG GTAGAGTACA
  AGTTTGAGGC CAGCCTGAGC TAAGTCCCTA AATCAAGAAT GAATAAAAAC AAAAAGTGAA
  GGCTAGAAAT CAATGTGTTA CACCACAAGG GGGTGATGTT TATCCACTAG CCCTAAATTC
  TGTCCCTTGA AACTGTTATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777643	NES10738757	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33146463					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777643	NES10738757	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95767675 () rs orientation: forward

Symbol	Name	Function Class
Gm26594	predicted gene, 26594	within coordinates
Rr581053	regulatory region 581053	1739 bp distal
Rr581054	regulatory region 581054	48 bp proximal
Rr581055	regulatory region 581055	139 bp proximal
Rr581056	regulatory region 581056	1054 bp proximal
Rr581057	regulatory region 581057	1401 bp proximal
Rr581058	regulatory region 581058	1665 bp proximal