rs33145454 SNP Detail

Summary

• ID
  rs33145454
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95765679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTTTTCT TCAGATTGTC
  TCTGAATTCC TGGGCTTAGG TAATCTTCAT TCTTTAGCAT GAGCAGTTAG GACTAAATGT
  GTGTGTGTGG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGCTCTCT
  CGAGTGTGCA TGCATGCCAC CGTGAATACT TAGGACTAAG CTTGGGTGTC ACTGTGCCTC
  R
  CTCTTTTTGT CATTTCCTCA TGATGGAAAC AATTCAGAAA AAAAAAATAT GGAGGAATCA
  CAGGCAGTGG AAGGCTAACA CTATTTTAAA TTCACTTGGT TAAATACTGA AAATAAAACT
  GGCTCCTTGT GCTGGAGAGG TGGCTTAGTG GGTAAGAGCA CTGACTGCTC TTCTGAAGGT
  CCTGAGTTCA AATCCCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777622	NES10738912	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33145454					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777622	NES10738912	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95765679 () rs orientation: forward

Symbol	Name	Function Class
Gm26594	predicted gene, 26594	within coordinates
Rr581052	regulatory region 581052	1823 bp distal
Rr581053	regulatory region 581053	236 bp proximal