rs33100290 SNP Detail

Summary

• ID
  rs33100290
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125904044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGAGAGT AGGGTTAAAA
  AAGAGCAGAG CTCCGCAGGG TGGTGGTGGC ACACTCCTTT AATCCCAGCA CTCGGGAGGC
  AGAGGCAGGT GGATTTCTGA GTTCGAGGCC AGCCTGGTCT ACAGAATGAG TTTCAGGACA
  GCCAGGGCTA TTCTGCCCTG TCTTGAACCC CTCCCCTGCC CCCAAAAAAG GGCAGAGCTC
  M
  GATGTCAAGA ATGGTGTTAA TTATGGAACC GGGAATGAGA GGGCCTCATG TGCCACCCAG
  TAGGTGGGAT CTGTGGTAAG TGGGAATTTC ATCTGGGAGA AGAGAAATGA GAATTTTTTT
  TTTAAATTTC AGTTTCAAAG CTTAATGGTT TGGAAAATAA TGGTTCCAAT TAAACAAAAC
  AGGAAAATTT AACAGAACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45237143	mCV24457990	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss147494605	ENSMUSSNP2072471	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss320498392	CHEV_2_125887860	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33100290					SNP	C	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125904044 () rs orientation: forward

Symbol	Name	Function Class
Fam227b	family with sequence similarity 227, member B	Intron
Fgf7	fibroblast growth factor 7	Intron
Rr564314	regulatory region 564314	689 bp distal