rs33067110 SNP Detail

Summary

• ID
  rs33067110
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:146682568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAATACC AATCTGTCAA
  CCGATGTAGA TATTCTAAAC TATTGTCAAA TTCAGTTTTA GAAGGAATCT AATTCTCATA
  TCCAGTTTCC CTAAAATGAG CCTGGAGGGC CAGGAGGGGC CAGTCTCTGT CGACAGAGAC
  TACAGTGAAG CTAGGTAGTA GTTAAAGTTT TCTGCACAAA TCTTAGATCC AGCCAACTTG
  K
  ACTCTCTTTT AAAATATGAA ATAGGCCAGA TGCTGTGGTG CTTGCCTGTA ATCCAGCACT
  TGGGAGGTAG AGATCAAAGA ATCAAGAGTT CCAGCTCACT CTTAGTTGAA AAGCGAGCTG
  GAGGTCAGTG TGACCTACAG AAGACCTTGA AAAAAATAGA CCCACTTAAA AAATAAACCA
  ATAAATAAAA ATATAAGATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45233407	mCV23999493	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147873715	ENSMUSSNP5582864	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss320546146	CHEV_2_146666384	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33067110					SNP	T	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:146682568 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12372	CpG island 12372	905 bp distal
Gm14114	predicted gene 14114	1052 bp upstream
Gm34978	predicted gene, 34978	222 bp downstream
Rr566735	regulatory region 566735	1853 bp distal
Rr566736	regulatory region 566736	1118 bp distal
Rr566737	regulatory region 566737	657 bp distal
Tssr20612	transcription start site region 20612	1647 bp downstream