rs33025428 SNP Detail

Summary

• ID
  rs33025428
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148083610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA TGGGCAAACC TTGAAATTGC
  M
  CTCCTGGGGC ACTGGTCAGG ATCAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45728099	mCV23435478	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss147989357	ENSMUSSNP4391319	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss321416322	CHEV_4_147373262	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33025428					SNP	C	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148083610 () rs orientation: forward

Symbol	Name	Function Class
Gm13054	predicted gene 13054	1938 bp downstream
Nppa	natriuretic peptide type A	1569 bp upstream
Rr407043	regulatory region 407043	772 bp proximal
Rr604546	regulatory region 604546	1079 bp proximal
Tssr40239	transcription start site region 40239	1480 bp upstream
Tssr40240	transcription start site region 40240	1582 bp upstream
Tssr40241	transcription start site region 40241	1938 bp upstream