rs32982336 SNP Detail

Summary

• ID
  rs32982336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:167959856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCGGGGCC CATATTCCCC
  CTCCCAACCC GTTCCCATTC CCACCCATCT CCCTTGGTCT CATACTCACC CTGGTCCCAC
  CCCTACCCAG GGCCGGTATC CCCTTCCCCA GTCTTATCTC CACCCAGATC CCATCCCCAC
  CTGGGACCTC TGGCCATCCC TACTTGGAGC CCAATCTTAT CTGGGACCCA CCCCACAAGA
  R
  TCTCATCTCC ATGCAGGGAC CCCAGCGTCC CCAGGTTTCC AGTGCACAGG GCTGAGAACG
  CCCAGAGCTA CCACCCTGTG CCACGTAGGG CCATAGAGGG GCCCTGGAGA CGCCACCTTG
  GCGCATAGTC CCTGCAGGGT CTCAGCCCCC TCAGCTCCTC TCGGCTGAGC CAGATGCCTG
  GAGCGGTGTG TGGGTTCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45221339	mCV25281642	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148266312	ENSMUSSNP329609	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32982336					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:167959856 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12763	CpG island 12763	within coordinates
Gm52960	predicted gene, 52960	within coordinates
Rr374237	regulatory region 374237	1840 bp downstream
Rr570896	regulatory region 570896	within coordinates
Rr570897	regulatory region 570897	606 bp distal
Rr570898	regulatory region 570898	1199 bp proximal
Tssr27826	transcription start site region 27826	1234 bp downstream