rs32946320 SNP Detail

Summary

• ID
  rs32946320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141810957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCC TATTTTACAG GCGAAGAAAC
  Y
  AAGGACCCTG GAGGACCGCT GGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45716537	mCV22555376	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss147748430	ENSMUSSNP4299025	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32946320					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141810957 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15252	CpG island 15252	112 bp proximal
Rr603987	regulatory region 603987	1253 bp distal
Rr603988	regulatory region 603988	162 bp proximal
Rr603989	regulatory region 603989	654 bp proximal
Rr603990	regulatory region 603990	705 bp proximal
Rr603991	regulatory region 603991	1313 bp proximal
Tmem51	transmembrane protein 51	Intron
Tmem51os1	Tmem51 opposite strand 1	652 bp upstream
Tssr44419	transcription start site region 44419	551 bp downstream
Tssr44420	transcription start site region 44420	575 bp downstream
Tssr44421	transcription start site region 44421	881 bp downstream
Tssr44422	transcription start site region 44422	1019 bp downstream