rs32941007 SNP Detail

Summary

• ID
  rs32941007
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141812696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATT CTCCCTCAAC CTCTCCACCC
  S
  GCACAGCCCG GGCCTATAGT TTGCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45715830	mCV22555357	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss147748476	ENSMUSSNP4906404	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32941007					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141812696 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15252	CpG island 15252	575 bp distal
Rr603988	regulatory region 603988	1035 bp distal
Rr603989	regulatory region 603989	1064 bp distal
Rr603990	regulatory region 603990	within coordinates
Rr603991	regulatory region 603991	405 bp distal
Tmem51	transmembrane protein 51	1081 bp upstream
Tmem51os1	Tmem51 opposite strand 1	within coordinates
Tssr44419	transcription start site region 44419	1166 bp upstream
Tssr44420	transcription start site region 44420	1123 bp upstream
Tssr44421	transcription start site region 44421	822 bp upstream
Tssr44422	transcription start site region 44422	702 bp upstream