rs32883386 SNP Detail

Summary

• ID
  rs32883386
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138186869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGT TGTCTCAGCA CTTCTAGAAA
  M
  CCAGTGACAT TCACTTACCA GTTAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45707888	mCV24614325	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss147647531	ENSMUSSNP4676408	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
ss321373813	CHEV_4_138015473	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32883386					SNP	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138186869 () rs orientation: forward

Symbol	Name	Function Class
Camk2n1	calcium/calmodulin-dependent protein kinase II inhibitor 1	mRNA-UTR
Rr377275	regulatory region 377275	1184 bp downstream
Rr602934	regulatory region 602934	271 bp proximal
Rr602935	regulatory region 602935	347 bp proximal
Tssr39867	transcription start site region 39867	1939 bp downstream
Tssr39868	transcription start site region 39868	1869 bp downstream
Tssr39869	transcription start site region 39869	1641 bp downstream
Tssr39870	transcription start site region 39870	1612 bp downstream
Tssr39871	transcription start site region 39871	1556 bp downstream
Tssr44170	transcription start site region 44170	361 bp downstream