rs32883042 SNP Detail

Summary

• ID
  rs32883042
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:88131893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAATATTC AAAATTTAGT AAAAAATAAA TTGCTTGCTG
  GGCGGTCTTG GCACGCGCCT TTAATCCCAG CACTTGGGAG GCAGAGGCAG GTGGATTTCT
  R
  AGTTCGAGGT TTGAGGCCTT CCTGGTCTAC AAAGTGAGTT CCAGGACAGC CAGGGCTACA
  CAGAGAAACC CTGTCTCGAA AAAACAAACA AACAAACAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45707164	mCV23997613	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss321202872	CHEV_4_87859560	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32883042					SNP	A	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88131893 () rs orientation: forward

Symbol	Name	Function Class
Focad	focadhesin	Intron
Rr594974	regulatory region 594974	1807 bp distal
Rr594975	regulatory region 594975	273 bp proximal