rs32863302 SNP Detail

Summary

• ID
  rs32863302
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153504714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATACACGG GATTAGCAGA
  GGTGACATTT CACTAGACAG AAACTAGGTG ATTATAGGAT GTACTTTGGG GACTACATCA
  ATATAATGAT GCTTCTGTCC CATGGCCTTT TTTCCTCTAG GACATGACAG GAGATGGAGA
  CAGAGATGAT GAAGTAGATG ATGGGAATGG CTCTGATATT CTAATGCCAA AGCTCACCCG
  K
  GAGACCAAGG ACACCAGGAC GCGCTCTGAA AGCCCGGCTG TAAGTCCTAC TGCTTATCAG
  GCACCTCTCA CCATCCTTGG GCCTGCATAA AAAAATGAGA GGCTGAGACA CTGTTTAATC
  AGAATTTGTT TTCCCGGCAC ATTGGATTTT ATGTGTGTTG CGTAGGTCAG TGGACAGTTT
  ACAAGAGCTA GGTTTTCACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45204162	mCV23544191	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
ss148000173	ENSMUSSNP3233339	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32863302					SNP	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153504714 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnmt3b	DNA methyltransferase 3B			Coding-Synonymous
				Noncoding-Transcript-Variant
Rr567717	regulatory region 567717			1821 bp distal
Rr567718	regulatory region 567718			1117 bp proximal