rs32862532 SNP Detail

Summary

• ID
  rs32862532
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148084984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAT CAGCAAGAAT GTGACTCTTG
  M
  AGCTGAGGGT CTGGGGGAGG GGGGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45704861	mCV23435772	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss147989403	ENSMUSSNP5770064	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss321416333	CHEV_4_147374636	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32862532					SNP	A	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148084984 () rs orientation: forward

Symbol	Name	Function Class
Gm13054	predicted gene 13054	564 bp downstream
Nppa	natriuretic peptide type A	195 bp upstream
Rr407043	regulatory region 407043	within coordinates
Rr604546	regulatory region 604546	within coordinates
Rr604547	regulatory region 604547	884 bp proximal
Tssr40239	transcription start site region 40239	106 bp upstream
Tssr40240	transcription start site region 40240	208 bp upstream
Tssr40241	transcription start site region 40241	564 bp upstream
Tssr40242	transcription start site region 40242	798 bp upstream
Tssr40243	transcription start site region 40243	1265 bp upstream
Tssr40244	transcription start site region 40244	1438 bp upstream
Tssr44568	transcription start site region 44568	1536 bp downstream