rs32858595 SNP Detail

Summary

• ID
  rs32858595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139188062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA ATTCCAGTAA TAATAAATAC
  Y
  TTAAAGACAT GGAGTGACCA TGGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45704534	mCV23716671	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
ss147671901	ENSMUSSNP6864845	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
ss321381508	CHEV_4_139016666	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32858595					SNP	T	T	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139188062 () rs orientation: forward

Symbol	Name	Function Class
Rr603222	regulatory region 603222	446 bp distal
Tssr1357	transcription start site region 1357	472 bp downstream
Ubr4	ubiquitin protein ligase E3 component n-recognin 4	Intron