rs32856632 SNP Detail

Summary

• ID
  rs32856632
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:167960107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGAGAACG CCCAGAGCTA
  CCACCCTGTG CCACGTAGGG CCATAGAGGG GCCCTGGAGA CGCCACCTTG GCGCATAGTC
  CCTGCAGGGT CTCAGCCCCC TCAGCTCCTC TCGGCTGAGC CAGATGCCTG GAGCGGTGTG
  TGGGTTCCAG GAAGCCCCGA GGCGGCGGGC AGCTATGGTT GCTAAGAAAA AGAAGAAGAA
  R
  AAAAAAAAAA TACCGCGTGA GTCCTGGTCG TATTTTCTAT TTTAAACGCA TAAACACAAA
  GTAGATCTAA AACTAGAGAC TCCAGCTGTG GCGGGCGGTC TGTCTAGGTG TAGGGAAAAA
  AAAAAAAAGT TACCTACCCA AGTTCTCCAC TCGGCTTCTT TTAAGACCCC CCACAGTGGT
  GCAGGCAGTT GGTAGATGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45204599	mCV25281641	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss148266316	ENSMUSSNP7155486	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32856632					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:167960107 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12763	CpG island 12763	233 bp distal
Gm52960	predicted gene, 52960	within coordinates
Rr570896	regulatory region 570896	23 bp distal
Rr570897	regulatory region 570897	857 bp distal
Rr570898	regulatory region 570898	948 bp proximal
Tssr27826	transcription start site region 27826	983 bp downstream