rs32833031 SNP Detail

Summary

• ID
  rs32833031
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36567607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGTTTCT TTAAATAAGG
  CTTGGGTCCT AGCTGGTTTT TGTATGTGTG TGTTTTTCAT GTCTGTGCTT AGTGCCTGCA
  GAGGCCAGCA GACGTTGGCT CCTTCTGGAC CTGGATCCTT TGGAAGAGCT GGGGGACAGC
  TGGTGACTTG CAAAACTTAA ACTCTTGGCC CTTTGCCAAG TTTTCTGAGC CCTGGCCTCC
  K
  ATTCAAATGG TAAATCTTCC CCATAGTATG TTTGGGTGGA TTTGTGTGGC ACCCTGAGTT
  GTCAGCTAAT TCATGTTAGT TTCTGTCTAC TGCACTCCAG ATCACTAAAG CTGAACCCAC
  TTTAGGTCCC CCCCTCTTTT CTCTTAAACT AGGGTACCAG GCTGGGTGTG GTGCATGGCT
  TTAATCCTAA CACTCAGAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219942	NES11097058	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32833031					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219942	NES11097058	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36567607 () rs orientation: forward

Symbol	Name	Function Class
Ankrd23	ankyrin repeat domain 23	1662 bp downstream
Cnnm3	cyclin M3	289 bp downstream
Gm38033	predicted gene, 38033	289 bp upstream
Gm42417	predicted gene, 42417	1667 bp downstream
Rr409335	regulatory region 409335	within coordinates