rs32833028 SNP Detail

Summary

• ID
  rs32833028
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36567400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTCTGTA GACCAGGCTG
  GCATTGAACT CAGAAATCCA CCTGCCTCTG CCTCCCAAGT GCTGGAATTA AAGGCGTGTG
  CCACCACTGC CCGGCCTGAT TAAATTCATT TTTATCAAAT TTTCCATTGT ACTTTTACCA
  TATCTGTCTC AATTGCCTTT CTTCCTAATA GTTTGTTTTA CATGTAAGCT TGTGGTCCAT
  Y
  TTGAAATATT GTTTCTTTAA ATAAGGCTTG GGTCCTAGCT GGTTTTTGTA TGTGTGTGTT
  TTTCATGTCT GTGCTTAGTG CCTGCAGAGG CCAGCAGACG TTGGCTCCTT CTGGACCTGG
  ATCCTTTGGA AGAGCTGGGG GACAGCTGGT GACTTGCAAA ACTTAAACTC TTGGCCCTTT
  GCCAAGTTTT CTGAGCCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219939	NES11097101	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32833028					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219939	NES11097101	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36567400 () rs orientation: forward

Symbol	Name	Function Class
Ankrd23	ankyrin repeat domain 23	1869 bp downstream
Cnnm3	cyclin M3	82 bp downstream
Gm38033	predicted gene, 38033	82 bp upstream
Gm42417	predicted gene, 42417	1874 bp downstream
Rr409335	regulatory region 409335	within coordinates