rs32826955 SNP Detail

Summary

• ID
  rs32826955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135580885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATCTGTG AGTATGAGAC
  CAGTCTAGTT CCAAACCAAG GAAGGCTACA TAGTGAGTGT TTGAGTGTTT TTGCTTGCAT
  GTCTATGTAA ATAAATGTTA AAACTAGTGT AATGGGTCCT AGGTGTGTGG AAGTAGGTTT
  AACCTGGGTT GTATTTTTGT TGTTATTAAA GACAGTGTCT TTCTGTGTAG CCCTGGCTGT
  Y
  CTAGAACTCA CTGTATAGAA CAGGCTGTCC TCCAACTCAC AGAAATCCTC CTGACTCTAC
  CTCCCAAGCA CCTGGGATCA AAGGCATGCC CCACAATGCC ATGCTTATCT TGTGTTTTCT
  ATCCACAGAC ATATATATGT TATTGCTTGC CGAGAGACCA TCTCTCTACT ATATCAATAG
  CAGTTAACTA TCCATGTAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
ss45700287	mCV24798539	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss321353313	CHEV_4_135409489	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	LG/J	SM/J
rs32826955					SNP	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss147552047	ENSMUSSNP668952	ENSEMBL	ENSEMBL_Sanger	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135580885 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15082	CpG island 15082	1860 bp proximal
Gm13000	predicted gene 13000	104 bp upstream
Gm57106	predicted gene, 57106	1560 bp downstream
Gm69173	predicted gene, 69173	within coordinates
Rr602158	regulatory region 602158	786 bp distal
Rr602159	regulatory region 602159	429 bp proximal
Rr602160	regulatory region 602160	1581 bp proximal
Rr602161	regulatory region 602161	1683 bp proximal