rs32793573 SNP Detail

Summary

• ID
  rs32793573
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119295843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTCTGGA ACGCTCTAGT
  GTACATTTTC CACCAAACTC CCCCTTTATA AGCACAGTGA AGTCTTTCAT TCAGACTTCT
  CCAAAAATGT GTTTATAATT CCCAAAGTTA CAGAATCTGA AAGAGTCACA ACTCAGAGAC
  ACATTTCCTC TTGTGCAGCT ATTTGTTAAA TCTTCTCTCT GAAATAATCT CTCAGCTTTC
  Y
  CTTGTTTCTT TTGACTTCAG AGATCATTAG CCAATTAAAA AAAATATACA TTATTTTACA
  TATCTGGGTA TTTCACCTGC AGGTATGTTT GTCTACCTAC TATTCCTAGT ACCTGAGAAA
  GCCAGAAGAG GGCACAAGAT CCCTTGGAAT CAGAGTTACA GACAGCCACG TAGGTGCTGG
  GACTTGAACC CTTTGTACTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45695848	mCV25416530	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147329953	ENSMUSSNP2915916	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32793573					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119295843 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr598588	regulatory region 598588			118 bp proximal
Zmynd12	zinc finger, MYND domain containing 12			Intron
				Noncoding-Transcript-Variant