rs32738063 SNP Detail

Summary

• ID
  rs32738063
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141811215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGA GCGACGCGGG GAGGCGGGAG
  W
  ACTCCACATC AGCCGGGTGC GGCTA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45687179	mCV22555370	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
ss321392527	CHEV_4_141639819	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32738063					SNP	T	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141811215 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15252	CpG island 15252	within coordinates
Rr603987	regulatory region 603987	1511 bp distal
Rr603988	regulatory region 603988	within coordinates
Rr603989	regulatory region 603989	396 bp proximal
Rr603990	regulatory region 603990	447 bp proximal
Rr603991	regulatory region 603991	1055 bp proximal
Tmem51	transmembrane protein 51	Intron
Tmem51os1	Tmem51 opposite strand 1	394 bp upstream
Tssr44419	transcription start site region 44419	293 bp downstream
Tssr44420	transcription start site region 44420	317 bp downstream
Tssr44421	transcription start site region 44421	623 bp downstream
Tssr44422	transcription start site region 44422	761 bp downstream