rs32734633 SNP Detail

Summary

• ID
  rs32734633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148214100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACAGGGA AAGTACAGAG
  AATAGGATTT TGGATGGTGG CAAGGTCTCT AAGCCTGGAC TTTGTGACAG GCTGTGGACC
  TCCACCCCCC ACCTCAACCA GGGACTGTAG AGTCCCTCTC TTGTCACCAC CAGCACCGCG
  AAAGTACCTA GGAGTGTTCT CTCATCCCTA CAGGTAGATC CTATTGTCCC TGTTTTATGA
  Y
  GGAGACACTA AGGCTCAGAC CTACACTCCT TTGTGTAAGA CTGCTTACTT CCAGAGCCCC
  AAGCCTAGAG TGACAGCAAC AAACCAGTTG AGAACATCTT GTCTGCTACC AGACTGGGGT
  GATGGACTAA AGGGACAAGC AGCAGTAGCA AGGGTCACTG CCTGAAAGAG TGAAGGCCAA
  GAGAGTACCC AGCTGAGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45687496	mCV24936140	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147993934	ENSMUSSNP2204392	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32734633					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148214100 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15291	CpG island 15291	429 bp proximal
Draxin	dorsal inhibitory axon guidance protein	Intron
Mad2l2	MAD2 mitotic arrest deficient-like 2	741 bp upstream
Rr604596	regulatory region 604596	within coordinates
Rr604597	regulatory region 604597	444 bp proximal
Rr604598	regulatory region 604598	1045 bp proximal
Rr604599	regulatory region 604599	1283 bp proximal
Tssr1378	transcription start site region 1378	1190 bp upstream
Tssr40251	transcription start site region 40251	1099 bp upstream
Tssr40252	transcription start site region 40252	1132 bp upstream
Tssr40253	transcription start site region 40253	1240 bp upstream
Tssr44585	transcription start site region 44585	995 bp downstream
Tssr44586	transcription start site region 44586	1008 bp downstream
Tssr44587	transcription start site region 44587	1035 bp downstream