ACATAGAGAG AACCTATCTC CAAAACTTTT TTTTTTTAAA TTGGTTTGTG TGTGCCATAG CATACACATG GAAGCCATAG GACAACTTTT GGGAACTGTT TTTCTCTCTG CTTTGTTGAG ACAGGGTTTT TCTGTCTCTG CCTCTCTTTG TACTGTAGGC TAGCTGGGCT GTGAACTTCA AGCTGATCTC TTTGTTTTTG Y CTTTCTTCTC ACAGTAGGGT GTTGGATTAC AGATTGGAGC CTAGGCTGCA CCCAGCTTTT TGTTGGTTCT GGGGATCAGA TTTAGATGGC CAAACTAGTG AGGCAAGTGC TGTACACCTG CAGAGTCCAG ATATACAATT TTTTTTTAAA AAAATTACAT TTATTTATTC TTTTCTTCTT AGTATTGCCC TGGCTGTTTT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45686647 | mCV22691425 | ABI | CRAMUS_MOUSE | f | SNP | C | T | T | ||
ss147123211 | ENSMUSSNP2723188 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T | |||
ss321230243 | CHEV_4_101167719 | CHEVERUD | SCREENING_POP | f | SNP | C | C | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32733027 | SNP | C | T | T | C | C |
Location: Chr4:101352311 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi14501 | CpG island 14501 | 1021 bp proximal | ||||||
Dnajc6 | DnaJ heat shock protein family (Hsp40) member C6 | 1517 bp upstream | ||||||
Rr596165 | regulatory region 596165 | 1219 bp distal | ||||||
Rr596166 | regulatory region 596166 | 1044 bp proximal | ||||||
Rr596167 | regulatory region 596167 | 1545 bp proximal | ||||||
Tssr37995 | transcription start site region 37995 | 1431 bp upstream | ||||||
Tssr37996 | transcription start site region 37996 | 1562 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|