rs32720369 SNP Detail

Summary

• ID
  rs32720369
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161616513 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAAT CATTTAACTT TGCAATCTCT
  M
  TTCTGGTCAC CAGATGAAAA CTGAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss45185115	mCV24537035	ABI	CRAMUS_MOUSE	f	SNP	C	C			C		A
ss60335630	NES15842720	PERLEGEN	MM_PANEL2	f	SNP			A	C		C		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs32720369					SNP	C	C	A	C	C	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60335630	NES15842720	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161616513 () rs orientation: forward

Symbol	Name	Function Class
Fasl	Fas ligand	449 bp upstream
Rr421846	regulatory region 421846	273 bp distal
Tssr14586	transcription start site region 14586	569 bp upstream
Tssr14587	transcription start site region 14587	488 bp upstream
Tssr14588	transcription start site region 14588	473 bp upstream
Tssr14589	transcription start site region 14589	461 bp upstream
Tssr14590	transcription start site region 14590	448 bp upstream
Tssr14591	transcription start site region 14591	438 bp upstream