rs32705376 SNP Detail

Summary

• ID
  rs32705376
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:81468860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTGTGTGC TCAGGGATCT GGAGAACCTA TGGCAGAAGC
  CCGAGGGAAA AGCAAAAAGT GGGAGGCACT TGGAGAAACA AGTATATATT TGAGTTAATA
  S
  AGCTCATATC TGACTGTGAA AATTTAAGTG GAAAAAAGAA ATTTTGAACT TTAGAACAAA
  ATATGTGTAT GTGTGATTAC ATATATCATA CACTATAATA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47201622	NES11217007	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32705376					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47201622	NES11217007	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:81468860 () rs orientation: forward

Symbol	Name	Function Class
Adam4	a disintegrin and metallopeptidase domain 4	140 bp upstream
Cox16	cytochrome c oxidase assembly protein 16	Intron
Rr387512	regulatory region 387512	within coordinates
S2bpcox16	synaptojanin 2 binding protein Cox16 readthrough	Intron
Tssr3881	transcription start site region 3881	150 bp upstream
Tssr116920	transcription start site region 116920	165 bp upstream