rs32697212 SNP Detail

Summary

• ID
  rs32697212
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82455635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGAGAGA AACGCCGCCC
  TGGAAGGAAA GGACACAGGT AGGGGAACTG CGGAGCGAGG GAGTGAGGCA GATAAGTTCC
  CCGTAGTCAG AGACTGGAGA TTAGTGTCCT CCAACCTTAG TTGCACGCTA TGCAGCGTAG
  CGCCTCATCG TTCCTCGCCA CCACTCCCTG CAGCTGCTAT TCACTCCACT TAGGAGTTCA
  Y
  CTAATCTGCA GAGAAAAGTG CAGGGCAGTG GCGAACCCCG ATGCAGGGAG GGAGCTGTGG
  TCCCTGGCTA TGTGAACAGC GACAGACACC TCAGGCTTGC GGGTGTGGGC TGGAGAGAGG
  TTCCACACTT GGGGTGGAGG GGCAGAATCC CACTCTGGGC TAGGAGTTTC CTTGTGTAAA
  AACCAAGGAG GAGAACGAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46716447	NES10748401	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs32697212					SNP	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46716447	NES10748401	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82455635 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13290	CpG island 13290	within coordinates
Gm64983	predicted gene, 64983	791 bp downstream
Npy2r	neuropeptide Y receptor Y2	244 bp upstream
Rr578785	regulatory region 578785	379 bp distal
Rr578786	regulatory region 578786	within coordinates
Rr578787	regulatory region 578787	1708 bp proximal
Tssr33789	transcription start site region 33789	274 bp upstream
Tssr33790	transcription start site region 33790	226 bp upstream