rs32681581 SNP Detail

Summary

• ID
  rs32681581
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119238591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTTAGAG CAAAGTCTCA
  TCTTTTATTT TCATTTCTTA CCTCATTAAA ATATTGTACT TTAATTGTCT CTTGGTCTTT
  CATTCTGCTG TCTCTTCAGT CCTCCTGGTT TAATGGTTAA TGATAACTCG GGCTCTAAGA
  TGGAAATCTC AATCCACATA AGTCACCAGT TAAAAAACCA TACAAGTGCG ACTAAAATAT
  M
  TGCAAAATAA GCTATGCTTG TTTAAATTAA TTTACAAAAT GATCTCTCTC TCTCTCTCTC
  TCTCTCTCTC TCTCTCTGTG TGTGTGTGTA TGTGTGTATA CACAGTATAT GTGGCCACAC
  TTGTAATGTC TCCCATGTGG AGGACAGAGG ACAACTTTTG TGGAGTCTTT TTTCTCCCTC
  TCCTTTTATG TGGTTCCGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J
ss45680397	mCV25417265	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss147328395	ENSMUSSNP6865362	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J
rs32681581					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119238591 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccdc30	coiled-coil domain containing 30			Intron
				Noncoding-Transcript-Variant
Rr598572	regulatory region 598572			266 bp proximal