rs32568138 SNP Detail

Summary

• ID
  rs32568138
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138918328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGC ATTGGGAATA TCTCTCCAAT
  R
  CACAGCTAGC TGTACCTGGC TTTTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45664790	mCV23716337	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss147667595	ENSMUSSNP5729724	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
ss321380202	CHEV_4_138746932	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32568138					SNP	A	A	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138918328 () rs orientation: forward

Symbol	Name	Function Class
9530077C14Rik	RIKEN cDNA 9530077C14 gene	835 bp downstream
Capzb	capping actin protein of muscle Z-line subunit beta	1882 bp upstream
Cpgi15162	CpG island 15162	1328 bp proximal
Rr377279	regulatory region 377279	within coordinates
Rr603133	regulatory region 603133	619 bp proximal
Rr603134	regulatory region 603134	1690 bp proximal
Rr603135	regulatory region 603135	1918 bp proximal
Tssr39900	transcription start site region 39900	1900 bp upstream
Tssr39901	transcription start site region 39901	1925 bp upstream
Tssr39902	transcription start site region 39902	1949 bp upstream
Tssr44214	transcription start site region 44214	1438 bp downstream
Tssr44215	transcription start site region 44215	1597 bp downstream
Tssr44216	transcription start site region 44216	1624 bp downstream
Tssr44217	transcription start site region 44217	1647 bp downstream