rs32553165 SNP Detail

Summary

• ID
  rs32553165
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:116137652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGA TAGCTGCTTT TGTTGTGTCC
  Y
  GTAAGTGTTC TTATGGAGTG CCTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45662217	mCV22662238	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss147278661	ENSMUSSNP2172097	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss321277352	CHEV_4_115953060	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32553165					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116137652 () rs orientation: forward

Symbol	Name	Function Class
Gm49337	predicted gene, 49337	Intron
Gm68669	predicted gene, 68669	within coordinates
Pik3r3	phosphoinositide-3-kinase regulatory subunit 3	Intron
Rr597898	regulatory region 597898	1933 bp proximal