rs32501560 SNP Detail

Summary

• ID
  rs32501560
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138188069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT GATACTCAGA TAGGGTATGA
  R
  CATCCAGGAA GTACTTCCTA TGTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45655727	mCV24614610	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss321373826	CHEV_4_138016673	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32501560					SNP	G	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138188069 () rs orientation: forward

Symbol	Name	Function Class
Camk2n1	calcium/calmodulin-dependent protein kinase II inhibitor 1	632 bp downstream
Gm70162	predicted gene, 70162	1444 bp downstream
Rr602934	regulatory region 602934	649 bp distal
Rr602935	regulatory region 602935	832 bp distal
Rr602936	regulatory region 602936	1923 bp proximal
Tssr44170	transcription start site region 44170	826 bp upstream