rs32455941 SNP Detail

Summary

• ID
  rs32455941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:75458119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGAATAGT TGGGAATATA GGGTGTGGAA TATGGGATCA
  GATGGTCTTT CTCTTACATT TTGCAGAGTG GGCAGGGAAA ATGTCCCCCA CAAGGATTTA
  R
  GATATGTATG GGTGTCCAAA GATTCCCCCC TCCTGCTCTG GGTACCTCCT CCCTCTGCAT
  GGTGCTCTGG ATAGCTTCAT CCCTTGCCCT CAGCTCTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45149358	mCV25162866	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss144695198	ENSMUSSNP4044718	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs32455941					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75458119 () rs orientation: forward

Symbol	Name	Function Class
Rr413452	regulatory region 413452	1885 bp distal
Rr413453	regulatory region 413453	1763 bp distal
Tmem198	transmembrane protein 198	Intron
Tssr7538	transcription start site region 7538	1958 bp downstream
Tssr7539	transcription start site region 7539	1882 bp downstream