rs32382440 SNP Detail

Summary

• ID
  rs32382440
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162692473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTC AGACTGGTCT GGACTTACAA
  Y
  GTAACCCAGG CTGGCCTTGA GCTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45140583	mCV23041829	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss145945106	ENSMUSSNP1954790	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32382440					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162692473 () rs orientation: forward

Symbol	Name	Function Class
Fmo1	flavin containing monooxygenase 1	Intron
Rr422026	regulatory region 422026	349 bp distal
Rr422027	regulatory region 422027	within coordinates
Rr422028	regulatory region 422028	1552 bp proximal
Rr422029	regulatory region 422029	1696 bp proximal
Tssr14673	transcription start site region 14673	1455 bp downstream
Tssr14674	transcription start site region 14674	1521 bp downstream
Tssr14675	transcription start site region 14675	1536 bp downstream
Tssr14676	transcription start site region 14676	1559 bp downstream
Tssr14677	transcription start site region 14677	1579 bp downstream
Tssr14678	transcription start site region 14678	1598 bp downstream