rs32376488 SNP Detail

Summary

• ID
  rs32376488
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:6389341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATGAGTGT GTGTGGGATA
  GTATCTCAGA GTAGTTTTGT TTTGCATTTT CTTGATGGCT AGTAATATTG AACATCTTTT
  TGTGGTCTGA GAGGTTTAGA CAGTTTCTCT GTGTGGCCCT GGTGTTCTGG AACTCACTCT
  GTAGACCGTG CTGTCCCTGA ACTTAGAGAT CTGCCTGCCT CTGCCTCCCA AGGGCAGGGA
  Y
  TAAAGGGTAG ATTCAAAGGC ATGTGCCAGC CCTCCCATTT TAAAATGGTT ACTGGACATT
  TTAAGTTATT TTGAAAAAAA ATTATTAGTT CATTTGGCCA TTTGTCGATT GGTAGTTTTA
  TCTCCTTAGT ATTTAACTTC TGCGATTATT TATAAGTCTG CCTATTAGCT GCTTGCCTGA
  AGTGTGGTGA AGGCTGTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45640591	mCV22885155	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss145961190	ENSMUSSNP2803793	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32376488					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6389341 () rs orientation: forward

Symbol	Name	Function Class
Rr588384	regulatory region 588384	870 bp proximal
Sdcbp	syndecan binding protein	Intron